This is a thin wrapper around labkey.selectRows()
.
Value
A data.frame containing LabKey demographic data with the columns specified in the single parameter provided.
Examples
# \donttest{
## Needs a connection to a LabKey server
library(nprcgenekeepr)
siteInfo <- getSiteInfo()
#> Warning: The nprcgenekeepr configuration file is missing.
#> It is required when the LabKey API is to be used.
#> The file should be named: /home/runner/.nprcgenekeepr_config.
colSet <- siteInfo$lkPedColumns
source <- " generated by getDemographics: "
pedSourceDf <- tryCatch(getDemographics(colSelect = colSet),
warning = function(wCond) {
cat(paste0("Warning", source, wCond),
name = "nprcgenekeepr"
)
return(NULL)
},
error = function(eCond) {
cat(paste0("Error", source, eCond),
name = "nprcgenekeepr"
)
return(NULL)
}
)
#> Warning generated by getDemographics: simpleWarning in getSiteInfo(): The nprcgenekeepr configuration file is missing.
#> It is required when the LabKey API is to be used.
#> The file should be named: /home/runner/.nprcgenekeepr_config.
#>
#> nprcgenekeepr
# }