R/getGVPopulation.R
getGVPopulation.Rd
If user has limited the population of interest by defining pop
,
that information is incorporated via the ped$population
column.
getGVPopulation(ped, pop)
ped | the pedigree information in datatable format |
---|---|
pop | character vector with animal IDs to consider as the population of interest. The default is NULL. |
A logical vector corresponding to the IDs in the vector of
animal IDs provided to the function in pop
.
# \donttest{ ## Example from Analysis of Founder Representation in Pedigrees: Founder ## Equivalents and Founder Genome Equivalents. ## Zoo Biology 8:111-123, (1989) by Robert C. Lacy library(nprcgenekeepr) ped <- data.frame( id = c("A", "B", "C", "D", "E", "F", "G"), sire = c(NA, NA, "A", "A", NA, "D", "D"), dam = c(NA, NA, "B", "B", NA, "E", "E"), stringsAsFactors = FALSE ) ped["gen"] <- findGeneration(ped$id, ped$sire, ped$dam) ped$population <- getGVPopulation(ped, NULL) # }