Get pedigree from file

Usage

getPedigree(fileName, sep = ",")

Arguments

fileName: character vector of temporary file path.
sep: column separator in CSV file. It is ignored for Excel (xls and xlsx) files.

Value

A data.frame of the pedigree as read from the file, with no quality control applied (see qcStudbook). Every column read from an Excel file is returned as character.

Examples

library(nprcgenekeepr)
ped <- getPedigree(fileName = system.file("testdata", "qcPed.csv",
  package = "nprcgenekeepr"
))