Obfuscated rhesus pedigree object

A pedigree object. Represents an obfuscated pedigree from obfuscated_rhesus_mhc_ped.csv where the IDs and dates have been modified to de-identify the data.

id

– character column of animal IDs

sire

– the male parent of the animal indicated by the id column. Unknown sires are indicated with NA

dam

– the female parent of the animal indicated by the id column. Unknown dams are indicated with NA

sex

– factor with levels: "F", "M". Sex specifier for an individual.

gen

– generation number (integers beginning with 0 for the founder generation) of the animal indicated by the id column.

birth

– Date vector of birth dates

exit

– Date vector, all NA (no exit dates are recorded in this obfuscated pedigree)

age

– numerical vector of age in years

Usage

data(rhesusPedigree)

Format

An object of class data.frame with 375 rows and 8 columns.

Examples

library(nprcgenekeepr)
data("rhesusPedigree")