Add genotype data to pedigree file — addGenotype • nprcgenekeepr

Assumes genotype has been opened by checkGenotypeFile

Usage

addGenotype(ped, genotype)

Arguments

ped: pedigree dataframe. ped is to be provided by qcStudbook so it is not checked.
genotype: genotype dataframe. genotype is to be provided by checkGenotypeFile so it is not checked.

Value

A pedigree object with genotype data added.

Examples

library(nprcgenekeepr)
rhesusPedigree <- nprcgenekeepr::rhesusPedigree
rhesusGenotypes <- nprcgenekeepr::rhesusGenotypes
pedWithGenotypes <- addGenotype(
  ped = rhesusPedigree,
  genotype = rhesusGenotypes
)